Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23117 : 11

Your submitted sequence: sequence (401 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PCONS (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.2	4e-39	0.148	0.215	0.481	1BO1_B	3.30.800.10.1.1 3.30.810.10.1.1
2	ffas.1	-0.112E+03	0.138	0.180	0.346	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
3	ffas.3	-0.102E+03	0.136	0.179	0.351	2YBX_A	N/A
4	pgenthreader.2	83.670	0.136	0.170	0.305	2YBX_A	N/A
5	pgenthreader.1	85.000	0.138	0.169	0.294	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
6	rpsblast.3	1e-36	0.137	0.167	0.289	2YBX_A	N/A
7	blast.2	1e-21	0.120	0.155	0.294	3X01_A	N/A
8	blast.3	1e-20	0.118	0.152	0.288	2YBX_A	N/A
9	ffas.2	-0.106E+03	0.120	0.149	0.266	2GK9_A	3.30.800.10.1.1
10	blast.4	2e-20	0.123	0.147	0.241	2GK9_A	3.30.800.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.