Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23116 : 10

Your submitted sequence: sequence (427 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser

PMODELLER (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.107E+03	0.122	0.151	0.267	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
2	pgenthreader.1	91.530	0.125	0.153	0.264	1BO1_A	3.30.800.10.1.1 3.30.810.10.1.1
3	rpsblast.1	9e-36	0.121	0.174	0.387	1BO1_B	3.30.800.10.1.1 3.30.810.10.1.1
4	pgenthreader.9	30.275	0.017	0.040	0.130	1IGY_B	2.60.40.10.6.4 2.60.40.10.8.1 2.60.40.10.29.2 2.60.40.10.18.2
5	pgenthreader.4	34.213	0.020	0.049	0.166	2B3O_A	3.30.505.10.9.1 3.30.505.10.8.2 3.90.190.10.7.3
6	pgenthreader.8	30.295	0.016	0.034	0.104	2F83_A	N/A
7	blast.4	3e-15	0.110	0.153	0.327	2GK9_A	3.30.800.10.1.1
8	blast.6	0.003	0.002	0.000	-0.006	2GK9_A	3.30.800.10.1.1
9	ffas.2	-0.104E+03	0.105	0.137	0.265	2GK9_A	3.30.800.10.1.1
10	pgenthreader.3	66.004	0.109	0.139	0.261	2GK9_A	3.30.800.10.1.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.