Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23106 : S52AA

Your submitted sequence: sequence (427 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.5	10	0.000	0.001	0.006	1IVM_A	1.10.530.10.1.2
2	blast.8	22	0.000	0.001	0.003	1JUG_A	N/A
3	pgenthreader.6	69.508	0.023	0.117	0.491	1KPL_A	1.10.3080.10.1.1
4	blast.3	5.1	0.000	0.001	0.003	1LMQ_A	N/A
5	ffas.2	-0.827E+01	0.034	0.137	0.548	1PV6_A	N/A
6	ffas.1	-0.906E+01	0.052	0.154	0.563	1PW4_A	N/A
7	pgenthreader.5	70.850	0.054	0.156	0.564	1PW4_A	N/A
8	ffas.9	-0.563E+01	0.006	0.011	0.031	1W9R_A	N/A
9	ffas.4	-0.672E+01	0.007	0.011	0.028	2H8N_A	N/A
10	blast.6	10	0.005	0.006	0.008	2NWD_X	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.