Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23101 : GI

Your submitted sequence: sequence (126 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.604E+01	0.023	0.026	0.036	1DUL_A	1.10.260.30.3.1
2	ffas.3	-0.642E+01	0.059	0.072	0.125	1YRV_A	N/A
3	pgenthreader.5	26.028	0.059	0.095	0.239	1Z6M_A	N/A
4	ffas.8	-0.601E+01	0.033	0.015	-0.059	2A13_A	N/A
5	ffas.10	-0.590E+01	0.037	0.004	-0.128	2B45_X	2.60.120.180.1.3
6	pgenthreader.8	25.759	0.060	0.083	0.176	2FIY_A	N/A
7	ffas.4	-0.628E+01	0.032	0.008	-0.087	2FR2_A	N/A
8	rpsblast.6	5.9	0.054	0.019	-0.120	2HOX_B	N/A
9	rpsblast.9	84	0.019	-0.008	-0.114	2J5G_E	N/A
10	ffas.5	-0.609E+01	0.055	0.073	0.147	2J7U_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.