Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23098 : kmp

Your submitted sequence: sequence (241 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.361E+02	0.057	0.072	0.130	1G5V_A	2.30.30.140.2.1
2	rpsblast.9	1.6	0.010	0.001	-0.034	1QZV_U	N/A
3	ffas.16	-0.186E+02	0.050	0.079	0.193	1SSF_A	2.30.30.140.1.1 2.30.30.30.1.1
4	pgenthreader.10	32.730	0.034	0.089	0.307	1ZDY_A	N/A
5	blast.6	18	0.000	-0.002	-0.009	2AW5_B	N/A
6	ffas.11	-0.354E+02	0.065	0.073	0.106	2D9T_A	N/A
7	ffas.17	-0.185E+02	0.055	0.061	0.086	2DIG_A	N/A
8	blast.2	10	0.051	0.032	-0.042	2DIQ_A	N/A
9	ffas.3	-0.479E+02	0.084	0.097	0.148	2DIQ_A	N/A
10	pgenthreader.6	14.861	0.121	0.128	0.157	2DIQ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.