Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

Main Menu

Submission

23085 : SLC52A3

Your submitted sequence: sequence (469 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.10	53.404	0.013	0.080	0.348	1KS8_A	1.50.10.10.3.1
2	blast.6	18	0.002	0.000	-0.006	1NNH_A	3.30.930.10.2.1
3	ffas.2	-0.569E+01	0.028	0.118	0.479	1PW4_A	N/A
4	pgenthreader.3	61.067	0.024	0.118	0.495	1PW4_A	N/A
5	blast.1	1.5	0.004	0.009	0.027	1XJ5_C	3.40.50.150.15.2
6	ffas.4	-0.547E+01	0.003	0.004	0.010	2E61_A	N/A
7	ffas.9	-0.485E+01	0.004	0.010	0.036	2EA5_A	N/A
8	ffas.1	-0.708E+01	0.008	0.024	0.089	2GW6_A	N/A
9	rpsblast.10	5.1	0.007	0.009	0.019	2KIN_B	N/A
10	ffas.10	-0.483E+01	0.016	0.030	0.087	2KSR_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.