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© Arne Elofsson

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23082 :

Your submitted sequence: sequence (292 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.1
1e-130.0680.1630.544 1IUQ_A1.10.1200.50.1.1 3.40.1130.10.1.1
2
pgenthreader.1
58.3200.0630.1580.539 1IUQ_A1.10.1200.50.1.1 3.40.1130.10.1.1
3
ffas.1
-0.535E+020.0710.1560.495 1K30_A1.10.1200.50.1.1 3.40.1130.10.1.1
4
pgenthreader.2
40.7100.0450.1330.487 2CST_A3.90.1150.10.17.1 3.40.640.10.13.1
5
pgenthreader.6
38.7220.0450.1330.484 3II0_CN/A
6
pgenthreader.5
38.9870.0410.1230.452 4EU1_AN/A
7
pgenthreader.8
38.2340.0350.1220.471 2EO5_AN/A
8
pgenthreader.9
38.1180.0320.1220.482 3OTG_AN/A
9
pgenthreader.3
39.9260.0330.1200.469 1TV8_AN/A
10
pgenthreader.7
38.6670.0290.1180.475 3RSC_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center