Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

23073 : HBsAg

Your submitted sequence: sequence (387 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.1	-0.187E+02	0.014	0.080	0.342	1I3Q_A	N/A
2	pgenthreader.10	17.233	0.011	0.064	0.277	1KI0_A	2.40.20.10.1.4 2.40.20.10.1.5 2.40.20.10.1.3
3	pgenthreader.3	43.618	0.014	0.086	0.375	1N7D_A	N/A
4	ffas.10	-0.598E+01	0.007	0.032	0.131	1NEK_D	N/A
5	blast.9	24	0.005	0.008	0.018	1PZ5_B	2.60.40.10.32.3 2.60.40.10.15.1
6	ffas.5	-0.629E+01	0.005	0.028	0.119	1Q90_B	1.20.810.10.2.1
7	pgenthreader.2	45.008	0.013	0.095	0.421	1S58_A	2.170.30.10.3.1
8	blast.2	6e-08	0.008	0.005	-0.009	1WZ4_A	N/A
9	pgenthreader.6	13.379	0.007	0.004	-0.009	1WZ4_A	N/A
10	pgenthreader.7	13.379	0.003	0.003	0.002	1WZ4_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.