Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23072 : TEST

Your submitted sequence: sequence (12 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.132E+01	0.006	0.032	1BG8_A	1.10.890.10.1.1
2	pgenthreader.6	12.000	0.040	0.202	1C01_A	2.60.20.30.3.1
3	pgenthreader.7	12.000	0.037	0.183	1G8M_A	1.10.287.440.1.1 3.40.140.20.1.1 3.40.140.20.2.1 3.40.50.1380.5.1
4	ffas.9	-0.113E+01	0.057	0.286	1JPE_A	2.60.40.1250.1.1
5	ffas.4	-0.161E+01	0.059	0.295	1Q3M_A	N/A
6	ffas.1	-0.173E+01	0.060	0.298	1Q8H_A	N/A
7	rpsblast.3	169	0.036	0.182	1SSE_B	1.10.238.100.1.1
8	pgenthreader.3	12.000	0.062	0.311	1VJU_A	3.40.1500.10.1.1
9	ffas.10	-0.112E+01	0.028	0.138	1VRS_A	2.60.40.1250.1.1
10	ffas.5	-0.133E+01	0.056	0.279	1VZM_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.