Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23071 :

Your submitted sequence: sequence (739 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 20 models from 2 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	5e-12	0.010	0.018	0.050	1X58_A	N/A
2	rpsblast.2	6e-06	0.025	0.029	0.045	1X58_A	N/A
3	rpsblast.8	0.004	0.001	0.016	0.075	1XM9_A	N/A
4	blast.7	1.2	0.000	0.002	0.011	1YGH_A	3.40.630.30.6.3
5	blast.3	0.15	0.004	0.008	0.023	2AJE_A	N/A
6	rpsblast.9	0.004	0.017	0.018	0.022	2EQR_A	N/A
7	blast.8	1.6	0.000	0.008	0.040	2IEX_B	N/A
8	rpsblast.1	1e-06	0.005	0.016	0.058	2PFF_B	N/A
9	blast.5	0.78	0.007	0.012	0.033	2ROH_A	N/A
10	blast.6	0.96	0.004	0.007	0.018	2VJV_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.