Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23068 : CTXLP

Your submitted sequence: sequence (503 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.765E+01	0.008	0.024	0.090	1C3A_A	3.10.100.10.5.5
2	ffas.3	-0.769E+01	0.007	0.016	0.050	1GZ2_A	3.10.100.10.4.1
3	ffas.5	-0.761E+01	0.009	0.024	0.085	1JWI_A	3.10.100.10.19.2
4	ffas.9	-0.730E+01	0.008	0.022	0.077	1JWI_B	3.10.100.10.19.1
5	ffas.2	-0.792E+01	0.006	0.006	0.008	1L2G_A	2.70.230.10.1.1
6	rpsblast.10	2.8	0.005	0.002	-0.012	1QZV_U	N/A
7	rpsblast.4	0.25	0.003	0.002	-0.004	1QZV_U	N/A
8	rpsblast.8	2.5	0.003	0.002	-0.003	1QZV_U	N/A
9	ffas.6	-0.745E+01	0.008	0.025	0.091	1V4L_A	3.10.100.10.5.5
10	ffas.10	-0.727E+01	0.001	-0.001	-0.011	1VF5_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.