Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23067 : id:23066:1-193,624-727

Your submitted sequence: sequence (297 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.5	21	0.000	0.002	0.008	1CVR_A	3.40.50.10390.1.1 3.40.50.1460.5.1 2.60.40.10.114.1
2	ffas.7	-0.925E+01	0.013	0.038	0.140	1NEK_C	1.20.1300.10.1.1
3	ffas.1	-0.988E+01	0.012	0.032	0.112	1PV6_A	N/A
4	ffas.4	-0.978E+01	0.013	0.048	0.188	1Q16_C	N/A
5	pgenthreader.6	15.889	0.010	-0.033	-0.204	1R5S_A	N/A
6	pgenthreader.7	15.889	0.001	-0.009	-0.048	1R5S_A	N/A
7	pgenthreader.8	28.885	0.007	-0.013	-0.095	1WTH_A	N/A
8	pgenthreader.5	29.458	0.022	0.048	0.153	1ZRT_D	N/A
9	rpsblast.10	6.1	0.002	-0.002	-0.020	2AYU_A	N/A
10	pgenthreader.2	31.589	0.003	-0.018	-0.103	2BAF_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.