Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

23066 : 11D9

Your submitted sequence: sequence (727 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.5	-0.147E+02	0.058	0.124	0.387	3O7P_A	N/A
2	pgenthreader.3	52.525	0.062	0.120	0.354	1PW4_A	N/A
3	rpsblast.2	3e-88	0.050	0.115	0.377	3O7Q_A	N/A
4	pgenthreader.1	72.612	0.061	0.115	0.332	3WDO_A	N/A
5	rpsblast.1	1e-113	0.043	0.113	0.391	3WDO_A	N/A
6	rpsblast.4	9e-28	0.046	0.112	0.374	2CFQ_A	N/A
7	ffas.2	-0.252E+02	0.060	0.111	0.315	1PW4_A	N/A
8	ffas.1	-0.291E+02	0.059	0.104	0.286	2GFP_A	N/A
9	rpsblast.6	1e-21	0.042	0.103	0.348	4JR9_A	N/A
10	ffas.6	-0.130E+02	0.039	0.102	0.352	2XUT_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.