Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23062 :

Your submitted sequence: sequence (550 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.781E+02	0.220	0.271	0.473	1AUK_A	N/A
2	pgenthreader.8	126.828	0.230	0.275	0.453	1AUK_A	N/A
3	ffas.18	-0.194E+02	0.110	0.163	0.374	1EI6_A	3.40.720.10.7.1 3.30.1360.110.1.1
4	ffas.8	-0.785E+02	0.227	0.273	0.456	1FSU_A	N/A
5	ffas.7	-0.795E+02	0.219	0.277	0.511	1HDH_A	3.40.720.10.1.1 3.30.1120.10.1.1
6	pgenthreader.7	129.243	0.211	0.246	0.385	1HDH_A	3.40.720.10.1.1 3.30.1120.10.1.1
7	blast.3	2e-19	0.182	0.193	0.239	1P49_A	3.40.720.10.4.2 1.10.287.550.1.1 3.30.1120.10.4.1
8	ffas.6	-0.814E+02	0.204	0.247	0.418	1P49_A	3.40.720.10.4.2 1.10.287.550.1.1 3.30.1120.10.4.1
9	rpsblast.3	3e-30	0.195	0.220	0.321	1P49_A	3.40.720.10.4.2 1.10.287.550.1.1 3.30.1120.10.4.1
10	ffas.19	-0.150E+02	0.109	0.137	0.249	2D1G_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.