Pcons.net Protein Structure Prediction Meta Server Thursday, October 28 2021
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23060 : NP_003097.1 TRANSCRIPTION FACTOR SOX-2 [HOMO SAPIENS]

Your submitted sequence: sequence (317 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

rpsblast
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1 1e-320.1330.1370.155 2LEF_A1.10.30.10.6.1
2 2e-320.1250.1230.115 1J3D_A1.10.30.10.4.1
3 1e-310.1350.1260.089 1CKT_A1.10.30.10.3.1
4 1e-300.1370.1300.100 1QRV_A1.10.30.10.1.1
5 1e-290.1510.1430.113 2E6O_AN/A
6 1e-290.1390.1360.125 2CRJ_AN/A
7 4e-290.1550.1480.122 1J47_A1.10.30.10.2.1
8 9e-290.1620.1550.125 1GT0_D1.10.30.10.2.1
9 2e-280.1340.1270.098 1I11_A1.10.30.10.2.2
 
References
Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]
 
 
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