Pcons.net Protein Structure Prediction

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Friday, April 19 2024

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Submission

23060 : NP_003097.1 TRANSCRIPTION FACTOR SOX-2 [HOMO SAPIENS]

Your submitted sequence: sequence (317 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

rpsblast

Rank	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	1e-32	0.133	0.137	0.155	2LEF_A	1.10.30.10.6.1
2	2e-32	0.125	0.123	0.115	1J3D_A	1.10.30.10.4.1
3	1e-31	0.135	0.126	0.089	1CKT_A	1.10.30.10.3.1
4	1e-30	0.137	0.130	0.100	1QRV_A	1.10.30.10.1.1
5	1e-29	0.151	0.143	0.113	2E6O_A	N/A
6	1e-29	0.139	0.136	0.125	2CRJ_A	N/A
7	4e-29	0.155	0.148	0.122	1J47_A	1.10.30.10.2.1
8	9e-29	0.162	0.155	0.125	1GT0_D	1.10.30.10.2.1
9	2e-28	0.134	0.127	0.098	1I11_A	1.10.30.10.2.2

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]