Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23052 : XOO

Your submitted sequence: sequence (602 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 50 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.18	-0.979E+02	0.226	0.283	0.513	1A65_A	2.60.40.420.11.1 2.60.40.420.27.1 2.60.40.420.29.2
2	ffas.1	-0.109E+03	0.224	0.287	0.541	1AOZ_A	2.60.40.420.17.1 2.60.40.420.36.1 2.60.40.420.37.1
3	pgenthreader.2	177.248	0.288	0.329	0.492	1AOZ_A	2.60.40.420.17.1 2.60.40.420.36.1 2.60.40.420.37.1
4	rpsblast.2	1e-77	0.278	0.315	0.463	1AOZ_B	2.60.40.420.17.1 2.60.40.420.36.1 2.60.40.420.37.1
5	ffas.3	-0.104E+03	0.215	0.269	0.487	1GW0_A	2.60.40.420.25.1 2.60.40.420.32.1 2.60.40.420.39.1
6	blast.5	3e-17	0.216	0.224	0.255	1GYC_A	2.60.40.420.11.2 2.60.40.420.27.2 2.60.40.420.29.3
7	ffas.13	-0.988E+02	0.227	0.282	0.500	1GYC_A	2.60.40.420.11.2 2.60.40.420.27.2 2.60.40.420.29.3
8	blast.7	2e-15	0.216	0.228	0.276	1HFU_A	2.60.40.420.11.1 2.60.40.420.27.1 2.60.40.420.29.2
9	pgenthreader.6	13.976	0.275	0.284	0.321	1HFU_A	2.60.40.420.11.1 2.60.40.420.27.1 2.60.40.420.29.2
10	pgenthreader.7	13.976	0.001	0.003	0.010	1HFU_A	2.60.40.420.11.1 2.60.40.420.27.1 2.60.40.420.29.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.