Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 27 2024

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Submission

23050 : Repeat2-Q13936

Your submitted sequence: sequence (376 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.18	-0.135E+02	0.047	0.085	0.237	1F6G_A	N/A
2	pgenthreader.7	39.248	0.039	0.125	0.469	1G87_A	1.50.10.10.3.2 2.60.40.710.1.1
3	ffas.11	-0.146E+02	0.043	0.072	0.189	1J95_A	1.10.287.70.2.1
4	pgenthreader.5	42.534	0.057	0.093	0.235	1ORS_C	1.20.120.350.1.1
5	rpsblast.5	6e-19	0.061	0.091	0.212	1ORS_C	1.20.120.350.1.1
6	ffas.14	-0.145E+02	0.043	0.073	0.195	1S5H_C	1.10.287.70.2.1
7	ffas.4	-0.280E+02	0.058	0.126	0.399	2A0L_A	N/A
8	ffas.5	-0.272E+02	0.054	0.114	0.352	2A79_B	N/A
9	ffas.8	-0.155E+02	0.049	0.079	0.197	2A9H_A	1.10.287.70.2.1
10	ffas.10	-0.146E+02	0.044	0.075	0.198	2ATK_C	1.10.287.70.2.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.