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© Arne Elofsson

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23050 : Repeat2-Q13936

Your submitted sequence: sequence (376 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
ffas.2
-0.699E+020.1360.1980.447 3RVY_AN/A
2
rpsblast.3
9e-250.1060.1660.407 3RVY_BN/A
3
ffas.7
-0.262E+020.0950.1620.431 2R9R_BN/A
4
ffas.1
-0.742E+020.1010.1620.404 4DXW_AN/A
5
ffas.6
-0.266E+020.1000.1610.407 2ZD9_AN/A
6
rpsblast.1
7e-390.0930.1540.400 4BGN_AN/A
7
blast.2
4e-130.0840.1420.373 5X0M_AN/A
8
blast.6
2e-060.0850.1410.364 5XSY_AN/A
9
rpsblast.2
1e-320.0800.1400.381 4DXW_DN/A
10
blast.3
3e-100.0790.1390.377 5EK0_BN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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