Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23049 : Abhinandan

Your submitted sequence: sequence (638 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 40 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.9	73.831	0.024	0.086	0.335	1H6K_A	1.25.40.180.1.1 1.25.40.180.5.1 1.25.40.180.3.1
2	pgenthreader.8	74.215	0.027	0.098	0.381	1TR2_A	N/A
3	blast.5	0.76	0.013	0.013	0.012	1YB4_A	3.40.50.720.45.2 1.10.1040.10.4.2
4	blast.7	2.3	0.008	0.010	0.017	1ZNN_C	N/A
5	blast.3	1e-08	0.028	0.037	0.073	2B1E_A	N/A
6	pgenthreader.3	23.572	0.072	0.165	0.537	2B1E_A	N/A
7	pgenthreader.4	23.572	0.006	0.008	0.016	2B1E_A	N/A
8	rpsblast.2	1e-135	0.077	0.173	0.556	2B1E_A	N/A
9	ffas.2	-0.885E+02	0.066	0.107	0.269	2B7M_A	N/A
10	ffas.8	-0.862E+01	0.014	0.010	-0.004	2B9C_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.