Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23048 : h GRK2

Your submitted sequence: sequence (689 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.894E+02	0.295	0.292	0.282	1FOT_A	1.10.510.10.1.3 3.30.200.20.31.2
2	ffas.6	-0.906E+02	0.249	0.243	0.220	1MRV_A	1.10.510.10.5.1 3.30.200.20.5.3
3	blast.8	1e-62	0.297	0.295	0.286	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
4	pgenthreader.7	210.367	0.298	0.295	0.282	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
5	rpsblast.6	1e-108	0.305	0.298	0.271	1O6L_A	1.10.510.10.5.1 3.30.200.20.34.1
6	pgenthreader.5	211.731	0.294	0.295	0.299	1RDQ_E	1.10.510.10.1.1 3.30.200.20.31.1
7	rpsblast.5	1e-108	0.300	0.300	0.301	1RDQ_E	1.10.510.10.1.1 3.30.200.20.31.1
8	blast.9	5e-61	0.268	0.263	0.245	1VZO_A	1.10.510.10.5.2
9	rpsblast.8	1e-106	0.293	0.291	0.282	1XJD_A	3.30.200.20.5.2 1.10.510.10.5.3
10	ffas.17	-0.880E+02	0.309	0.300	0.265	1ZRZ_A	3.30.200.20.49.1 1.10.510.10.5.4

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.