Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23047 : p2shN

Your submitted sequence: sequence (136 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.8	29.000	0.044	0.073	0.189	1HN0_A	2.60.120.410.1.1 1.50.10.100.4.1 2.70.98.10.5.1 2.60.220.10.6.1
2	blast.2	6.5	0.024	0.024	0.024	1M0D_C	3.40.91.30.1.1
3	pgenthreader.5	29.474	0.044	0.063	0.137	1NIR_A	1.10.760.10.17.1 2.140.10.20.1.1
4	rpsblast.2	0.38	0.022	0.018	0.002	1QZV_U	N/A
5	pgenthreader.3	30.104	0.047	0.089	0.258	1RWI_A	2.120.10.30.5.1
6	blast.9	21	0.020	0.013	-0.014	1V9F_A	N/A
7	rpsblast.6	2.7	0.048	0.034	-0.020	1XZO_B	N/A
8	blast.7	19	0.024	0.014	-0.028	2BL0_B	N/A
9	blast.1	2.2	0.027	0.019	-0.015	2GJ8_C	N/A
10	ffas.9	-0.586E+01	0.057	0.060	0.074	2GSW_A	3.40.50.360.15.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.