Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23042 : dux4

Your submitted sequence: sequence (424 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 50 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.4	1e-20	0.087	0.088	0.094	1AHD_P	1.10.10.60.4.2
2	ffas.6	-0.291E+02	0.077	0.083	0.108	1AU7_A	1.10.260.40.1.2 1.10.10.60.9.1
3	ffas.10	-0.279E+02	0.076	0.082	0.104	1E3O_C	1.10.260.40.1.1 1.10.10.60.14.1
4	blast.2	2e-12	0.005	0.018	0.069	1FJL_A	1.10.10.60.2.1
5	blast.4	2e-11	0.104	0.100	0.086	1FJL_A	1.10.10.60.2.1
6	ffas.4	-0.304E+02	0.085	0.086	0.092	1FJL_A	1.10.10.60.2.1
7	pgenthreader.1	55.994	0.092	0.092	0.092	1FJL_A	1.10.10.60.2.1
8	rpsblast.3	7e-21	0.093	0.092	0.088	1FJL_C	1.10.10.60.2.1
9	rpsblast.9	1e-19	0.083	0.085	0.092	1FTT_A	N/A
10	rpsblast.1	1e-22	0.082	0.083	0.085	1FTZ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.