Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23029 :

Your submitted sequence: sequence (254 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.652E+01	0.005	0.034	0.150	1F3U_B	N/A
2	blast.1	3.5	0.022	0.062	0.222	1J0A_C	3.40.50.1100.9.1 3.40.50.1100.11.1
3	rpsblast.10	4.3	0.016	0.028	0.074	1LKY_B	1.10.150.50.1.1
4	rpsblast.5	0.35	0.006	0.010	0.024	1QZV_U	N/A
5	blast.2	4.1	0.014	0.027	0.078	1VL6_C	3.40.50.10380.1.2 3.40.50.720.84.1
6	pgenthreader.7	28.415	0.033	0.127	0.505	1W27_A	1.10.275.10.7.1 1.20.200.10.6.1 1.10.274.20.1.1
7	ffas.10	-0.625E+01	0.044	0.132	0.484	2A79_B	N/A
8	ffas.9	-0.641E+01	0.017	0.052	0.191	2BDV_A	N/A
9	rpsblast.7	2.1	0.018	0.026	0.058	2DKX_A	N/A
10	blast.9	28	0.007	0.011	0.026	2EBF_X	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.