Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 18 2024

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Submission

23028 : T0988 YP_006383572, GOOSE ADENOVIRUS 4, 204 RESIDUES|

Your submitted sequence: sequence (204 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	76.902	0.096	0.184	0.538	2VTW_A	N/A
2	rpsblast.1	1e-40	0.107	0.180	0.472	2VTW_F	N/A
3	rpsblast.2	0.007	0.100	0.162	0.409	2IUM_B	N/A
4	ffas.1	-0.135E+02	0.095	0.159	0.416	2VTW_A	N/A
5	ffas.2	-0.664E+01	0.088	0.140	0.346	2IUM_A	N/A
6	pgenthreader.10	45.530	0.057	0.113	0.335	2QLK_A	N/A
7	pgenthreader.2	51.052	0.056	0.108	0.317	2IUM_A	N/A
8	pgenthreader.4	48.569	0.028	0.099	0.382	3V9F_A	N/A
9	pgenthreader.5	47.007	0.027	0.083	0.308	4A2L_A	N/A
10	pgenthreader.7	45.858	0.029	0.079	0.277	3SUC_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.