Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23027 : 1 to 173 sln12

Your submitted sequence: sequence (173 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.6	-0.633E+01	0.037	0.041	0.057	1KAG_A	3.40.50.300.61.2
2	rpsblast.1	0.069	0.020	0.008	-0.039	1QZV_U	N/A
3	rpsblast.10	6.7	0.011	0.019	0.050	1QZV_U	N/A
4	rpsblast.2	0.25	0.021	0.013	-0.021	1QZV_U	N/A
5	ffas.5	-0.699E+01	0.021	0.022	0.024	1WII_A	N/A
6	ffas.8	-0.613E+01	0.035	0.048	0.102	1X2G_A	N/A
7	pgenthreader.10	24.258	0.048	0.088	0.250	1Z41_A	N/A
8	ffas.4	-0.717E+01	0.039	0.044	0.064	2IYQ_A	N/A
9	ffas.2	-0.783E+01	0.057	0.076	0.150	2KYY_A	N/A
10	rpsblast.3	0.31	0.018	-0.004	-0.094	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.