Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23025 : dnaB

Your submitted sequence: sequence (472 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.6	42.284	0.019	0.092	0.383	1N1B_A	1.50.30.10.1.1 1.10.600.10.4.1
2	blast.7	13	0.007	0.007	0.007	1PJ5_A	N/A
3	ffas.2	-0.180E+02	0.017	0.024	0.051	2I5U_A	N/A
4	rpsblast.6	0.13	0.013	0.024	0.067	2I5U_A	N/A
5	blast.8	22	0.005	0.003	-0.004	2J9O_B	N/A
6	ffas.5	-0.821E+01	0.015	0.033	0.103	2JSC_A	N/A
7	ffas.9	-0.759E+01	0.015	0.034	0.109	2LKP_A	N/A
8	rpsblast.7	0.39	0.011	0.011	0.010	2NN6_A	N/A
9	ffas.7	-0.767E+01	0.011	0.022	0.064	2PEX_A	N/A
10	ffas.8	-0.759E+01	0.011	0.023	0.073	2PFB_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.