Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23025 : dnaB

Your submitted sequence: sequence (472 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	46.176	0.041	0.118	0.427	2XUB_A	N/A
2	blast.1	1e-86	0.035	0.097	0.344	5WTN_C	N/A
3	pgenthreader.2	44.803	0.023	0.095	0.385	4M0M_A	N/A
4	pgenthreader.9	41.505	0.021	0.092	0.377	4BXH_A	N/A
5	pgenthreader.6	42.284	0.019	0.092	0.383	1N1B_A	1.50.30.10.1.1 1.10.600.10.4.1
6	pgenthreader.4	15.640	0.018	0.087	0.361	4A2P_A	N/A
7	pgenthreader.8	41.732	0.022	0.062	0.223	4AP2_B	N/A
8	pgenthreader.7	41.802	0.016	0.057	0.223	3O0Y_A	N/A
9	pgenthreader.3	44.209	0.012	0.055	0.226	4AKL_A	N/A
10	pgenthreader.10	41.446	0.011	0.051	0.209	4L9P_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.