Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23023 : QUERY

Your submitted sequence: sequence (141 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.2	1e-04	0.436	0.427	0.390	1KEA_A	1.10.1670.10.7.1 1.10.340.30.6.1
2	ffas.3	-0.511E+02	0.422	0.441	0.519	1KEA_A	1.10.1670.10.7.1 1.10.340.30.6.1
3	pgenthreader.7	46.445	0.367	0.399	0.528	1KEA_A	1.10.1670.10.7.1 1.10.340.30.6.1
4	rpsblast.6	1e-06	0.405	0.420	0.479	1KEA_A	1.10.1670.10.7.1 1.10.340.30.6.1
5	blast.7	0.25	0.333	0.335	0.343	1KG2_A	1.10.1670.10.2.1 1.10.340.30.2.1
6	ffas.4	-0.478E+02	0.422	0.444	0.534	1KG2_A	1.10.1670.10.2.1 1.10.340.30.2.1
7	rpsblast.5	5e-07	0.411	0.404	0.377	1KG2_A	1.10.1670.10.2.1 1.10.340.30.2.1
8	pgenthreader.3	58.324	0.419	0.419	0.420	1MUN_A	N/A
9	ffas.2	-0.691E+02	0.422	0.493	0.777	1NGN_A	1.10.340.30.8.1
10	blast.4	0.10	0.357	0.353	0.337	1ORN_A	1.10.340.30.5.1 1.10.1670.10.4.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.