Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

23021 : dHH

Your submitted sequence: sequence (74 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.3	0.16	0.056	0.049	0.023	1AM2_A	N/A
2	blast.1	1e-04	0.065	0.060	0.039	1AT0_A	N/A
3	ffas.1	-0.141E+02	0.067	0.061	0.039	1AT0_A	N/A
4	pgenthreader.1	35.629	0.069	0.063	0.039	1AT0_A	N/A
5	rpsblast.1	1e-05	0.065	0.060	0.039	1AT0_A	N/A
6	blast.5	8.3	0.042	0.027	-0.034	1EX7_A	3.30.63.10.2.1 3.40.50.300.121.1
7	ffas.6	-0.557E+01	0.052	0.017	-0.125	1GZU_A	3.40.50.620.9.2
8	blast.2	3.5	0.053	0.018	-0.123	1JI5_C	1.20.1260.10.4.1
9	rpsblast.10	11	0.040	-0.001	-0.164	1OLT_A	N/A
10	blast.7	16	0.048	0.009	-0.146	1QLE_C	1.10.287.70.4.1 1.20.120.80.1.2

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.