Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23014 : Pam18

Your submitted sequence: sequence (48 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.3	0.31	0.395	0.361	0.226	1FAF_A	1.10.287.110.3.1
2	ffas.5	-0.268E+02	0.452	0.430	0.342	1FAF_A	1.10.287.110.3.1
3	ffas.7	-0.256E+02	0.447	0.455	0.486	1HDJ_A	N/A
4	rpsblast.3	0.005	0.202	0.161	-0.003	1QZV_U	N/A
5	ffas.13	-0.245E+02	0.492	0.500	0.532	1WJZ_A	1.10.287.110.5.1
6	ffas.8	-0.254E+02	0.477	0.483	0.508	2CTP_A	N/A
7	rpsblast.6	0.21	0.475	0.422	0.212	2CTP_A	N/A
8	blast.7	1.8	0.349	0.364	0.426	2CTR_A	N/A
9	ffas.16	-0.232E+02	0.485	0.478	0.451	2CTR_A	N/A
10	ffas.20	-0.224E+02	0.491	0.463	0.350	2CTW_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.