Pcons.net Protein Structure Prediction Meta Server Tuesday, June 28 2022
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© Arne Elofsson

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23014 : Pam18

Your submitted sequence: sequence (48 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
blast.3
0.310.3950.3610.226 1FAF_A1.10.287.110.3.1
2
ffas.5
-0.268E+020.4520.4300.342 1FAF_A1.10.287.110.3.1
3
ffas.7
-0.256E+020.4470.4550.486 1HDJ_AN/A
4
rpsblast.3
0.0050.2020.161-0.003 1QZV_UN/A
5
ffas.13
-0.245E+020.4920.5000.532 1WJZ_A1.10.287.110.5.1
6
ffas.8
-0.254E+020.4770.4830.508 2CTP_AN/A
7
rpsblast.6
0.210.4750.4220.212 2CTP_AN/A
8
blast.7
1.80.3490.3640.426 2CTR_AN/A
9
ffas.16
-0.232E+020.4850.4780.451 2CTR_AN/A
10
ffas.20
-0.224E+020.4910.4630.350 2CTW_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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