Pcons.net Protein Structure Prediction

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Friday, April 26 2024

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Submission

23014 : Pam18

Your submitted sequence: sequence (48 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.1	3e-29	0.600	0.589	0.543	2GUZ_O	N/A
2	rpsblast.2	5e-04	0.558	0.542	0.477	2GUZ_O	N/A
3	pgenthreader.1	57.509	0.530	0.520	0.479	2GUZ_A	N/A
4	pgenthreader.3	33.173	0.520	0.519	0.514	2GUZ_B	N/A
5	pgenthreader.4	31.731	0.531	0.507	0.411	4J80_A	N/A
6	pgenthreader.5	31.419	0.538	0.504	0.369	4J7Z_A	N/A
7	pgenthreader.7	30.334	0.515	0.502	0.452	2YS8_A	N/A
8	ffas.13	-0.245E+02	0.492	0.500	0.532	1WJZ_A	1.10.287.110.5.1
9	pgenthreader.9	29.840	0.518	0.498	0.420	2LO1_A	N/A
10	ffas.1	-0.321E+02	0.503	0.498	0.479	2GUZ_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.