Pcons.net Protein Structure Prediction Meta Server Tuesday, August 16 2022
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© Arne Elofsson

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23013 : PAM18

Your submitted sequence: sequence (58 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
blast.5
6.30.0000.0300.151 1FAF_A1.10.287.110.3.1
2
ffas.3
-0.300E+020.3330.3930.631 1FAF_A1.10.287.110.3.1
3
pgenthreader.4
27.0310.4520.4870.628 1FAF_A1.10.287.110.3.1
4
rpsblast.10
0.180.4360.4370.442 1FAF_A1.10.287.110.3.1
5
ffas.8
-0.267E+020.3080.3760.648 1HDJ_AN/A
6
pgenthreader.8
23.3850.3420.3680.473 1IUR_AN/A
7
blast.6
8.40.0530.0450.011 1P16_B2.40.50.140.50.1
8
rpsblast.3
0.0060.1400.109-0.015 1QZV_UN/A
9
ffas.10
-0.263E+020.3360.4130.722 1WJZ_A1.10.287.110.5.1
10
ffas.7
-0.269E+020.3320.3830.586 2CTP_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center