Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23013 : PAM18

Your submitted sequence: sequence (58 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.5	6.3	0.000	0.030	0.151	1FAF_A	1.10.287.110.3.1
2	ffas.3	-0.300E+02	0.333	0.393	0.631	1FAF_A	1.10.287.110.3.1
3	pgenthreader.4	27.031	0.452	0.487	0.628	1FAF_A	1.10.287.110.3.1
4	rpsblast.10	0.18	0.436	0.437	0.442	1FAF_A	1.10.287.110.3.1
5	ffas.8	-0.267E+02	0.308	0.376	0.648	1HDJ_A	N/A
6	pgenthreader.8	23.385	0.342	0.368	0.473	1IUR_A	N/A
7	blast.6	8.4	0.053	0.045	0.011	1P16_B	2.40.50.140.50.1
8	rpsblast.3	0.006	0.140	0.109	-0.015	1QZV_U	N/A
9	ffas.10	-0.263E+02	0.336	0.413	0.722	1WJZ_A	1.10.287.110.5.1
10	ffas.7	-0.269E+02	0.332	0.383	0.586	2CTP_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.