Pcons.net Protein Structure Prediction

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Wednesday, April 24 2024

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Submission

23013 : PAM18

Your submitted sequence: sequence (58 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 49 models from 4 methods the score is NOT RELIABLE, models are sorted by Pcomb score)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.1	64.774	0.510	0.561	0.767	2GUZ_A	N/A
2	pgenthreader.6	25.307	0.508	0.549	0.712	2YS8_A	N/A
3	pgenthreader.2	34.420	0.502	0.540	0.694	2GUZ_B	N/A
4	rpsblast.1	4e-07	0.491	0.530	0.685	2GUZ_O	N/A
5	pgenthreader.5	25.378	0.480	0.512	0.642	2M6Y_A	N/A
6	rpsblast.2	3e-06	0.469	0.495	0.597	2GUZ_L	N/A
7	pgenthreader.4	27.031	0.452	0.487	0.628	1FAF_A	1.10.287.110.3.1
8	ffas.1	-0.422E+02	0.375	0.453	0.767	2GUZ_A	N/A
9	rpsblast.10	0.18	0.436	0.437	0.442	1FAF_A	1.10.287.110.3.1
10	ffas.6	-0.278E+02	0.357	0.428	0.712	2YS8_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.