Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

23009 : id:23008:1-102,132-344

Your submitted sequence: sequence (315 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 50 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.773E+02	0.195	0.239	0.414	1GZM_A	1.20.1070.10.6.1
2	rpsblast.6	0.76	0.010	0.004	-0.019	1QZV_U	N/A
3	rpsblast.8	6.9	0.024	0.014	-0.026	1YTM_B	N/A
4	rpsblast.9	9.0	0.015	0.010	-0.012	2A1L_A	3.30.530.20.5.1
5	ffas.2	-0.826E+02	0.211	0.256	0.434	2KS9_A	N/A
6	pgenthreader.3	100.124	0.260	0.297	0.446	2KS9_A	N/A
7	ffas.1	-0.915E+02	0.099	0.133	0.271	2LNL	N/A
8	pgenthreader.7	94.712	0.113	0.149	0.295	2LNL_A	N/A
9	rpsblast.7	2.7	0.054	0.043	0.001	2LOW_A	N/A
10	rpsblast.1	5e-04	0.036	0.014	-0.073	2PFF_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.