Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Thursday, April 25 2024

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Submission

23004 : STOP1

Your submitted sequence: sequence (499 aa)

Ready methods: PCONS PMODELLER blast ffas rpsblast
Queued locally: lomets itasser

PMODELLER (only used 40 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.18	-0.351E+02	0.031	0.040	0.074	1A1F_A	3.30.160.60.2.1 3.30.160.60.1.1 3.30.160.60.1.2
2	ffas.20	-0.351E+02	0.032	0.047	0.105	1A1H_A	3.30.160.60.2.1 3.30.160.60.1.1 3.30.160.60.1.2
3	ffas.19	-0.351E+02	0.032	0.042	0.081	1A1I_A	3.30.160.60.2.1 3.30.160.60.1.1 3.30.160.60.1.2
4	ffas.16	-0.351E+02	0.032	0.043	0.089	1A1L_A	3.30.160.60.2.1 3.30.160.60.1.1 3.30.160.60.1.2
5	ffas.17	-0.351E+02	0.031	0.042	0.085	1JK1_A	3.30.160.60.2.1 3.30.160.60.1.1 3.30.160.60.1.2
6	blast.4	0.005	0.041	0.046	0.064	1MEY_C	3.30.160.60.4.1 3.30.160.60.4.1 3.30.160.60.4.1
7	ffas.15	-0.358E+02	0.034	0.051	0.118	1MEY_C	3.30.160.60.4.1 3.30.160.60.4.1 3.30.160.60.4.1
8	ffas.2	-0.562E+02	0.034	0.051	0.118	1TF6_A	N/A
9	ffas.6	-0.448E+02	0.031	0.048	0.118	1UBD_C	3.30.160.60.8.2 3.30.160.60.9.1 3.30.160.60.4.2 3.30.160.60.7.1
10	rpsblast.1	4e-17	0.024	0.029	0.047	1VT4_N	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.