Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

23002 : kal

Your submitted sequence: sequence (378 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 48 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.9	-0.113E+03	0.543	0.591	0.782	1BY7_A	2.30.39.10.1.1 3.30.497.10.2.1
2	ffas.4	-0.116E+03	0.524	0.589	0.848	1IZ2_A	2.30.39.10.3.1 3.30.497.10.4.1
3	ffas.12	-0.112E+03	0.506	0.552	0.734	1LQ8_A	2.30.39.10.11.2 3.30.497.10.4.3
4	ffas.5	-0.115E+03	0.574	0.632	0.863	1OO8_A	2.30.39.10.3.1 3.30.497.10.4.1
5	ffas.14	-0.110E+03	0.551	0.607	0.831	1OVA_C	2.30.39.10.1.2 3.30.497.10.2.2
6	ffas.6	-0.115E+03	0.535	0.593	0.827	1QMN_A	2.30.39.10.10.1 3.30.497.10.4.2
7	pgenthreader.5	161.702	0.555	0.615	0.853	1QMN_A	2.30.39.10.10.1 3.30.497.10.4.2
8	rpsblast.9	3e-59	0.512	0.550	0.704	1UHG_A	2.30.39.10.1.2 3.30.497.10.2.2
9	blast.5	5e-23	0.525	0.569	0.747	1WZ9_A	3.30.497.10.6.1 2.30.39.10.1.3
10	ffas.20	-0.108E+03	0.539	0.585	0.767	1XQG_A	3.30.497.10.6.1 2.30.39.10.1.3

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.