Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Saturday, April 20 2024

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Submission

23001 : TR|B4H2S2|B4H2S2_DROPE GL26890 OS=DROSOPHILA PERSIMILIS OX=7234 GN=DPER\GL26890 PE=4 SV=1

Your submitted sequence: sequence (129 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.8	15	0.048	0.052	0.067	1C4K_A	3.40.50.220.1.1 3.40.640.10.40.1 3.90.1150.10.42.1 3.90.100.10.1.1
2	ffas.10	-0.586E+01	0.044	0.078	0.213	1M4U_A	2.10.90.10.10.1 1.10.287.520.1.1
3	pgenthreader.6	22.610	0.028	0.031	0.044	1Q8Y_A	3.30.200.20.9.2 1.10.510.10.23.2
4	rpsblast.1	0.92	0.020	0.033	0.085	1QZV_U	N/A
5	rpsblast.10	88	0.002	-0.001	-0.012	1QZV_U	N/A
6	pgenthreader.3	23.032	0.064	0.097	0.227	1U7L_A	3.30.70.1180.1.1 1.20.1460.10.1.1 3.30.70.100.5.1
7	rpsblast.7	14	0.031	0.014	-0.052	1Y71_B	N/A
8	blast.1	0.66	0.044	0.069	0.170	2C0J_B	N/A
9	ffas.3	-0.673E+01	0.061	0.083	0.169	2D9E_A	N/A
10	blast.8	13	0.047	0.054	0.081	2FJ6_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.