Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

22996 : id:22995:51-232

Your submitted sequence: sequence (182 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.5	27.091	0.047	0.059	0.109	1C0A_A	2.40.50.140.5.2 3.30.930.10.4.2 3.30.1360.30.1.2
2	ffas.8	-0.651E+01	0.041	0.045	0.063	1JM4_B	1.20.920.10.1.2
3	rpsblast.3	2.0	0.004	0.018	0.072	1QZV_U	N/A
4	rpsblast.5	13	0.017	0.020	0.032	1QZV_U	N/A
5	blast.5	5.8	0.015	0.008	-0.019	1T7Q_B	N/A
6	blast.2	0.19	0.031	0.032	0.036	1ZEJ_A	N/A
7	ffas.3	-0.682E+01	0.042	0.045	0.059	2E7O_A	N/A
8	blast.8	11	0.010	0.000	-0.039	2IQC_A	N/A
9	pgenthreader.6	26.769	0.025	0.044	0.118	2LTM_A	N/A
10	pgenthreader.7	26.768	0.024	0.039	0.099	2OGH_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.