Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

22992 : LCL|ORF1

Your submitted sequence: sequence (245 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 33 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.10	-0.706E+01	0.008	0.020	0.068	1A34_A	2.60.120.220.1.1
2	ffas.5	-0.548E+02	0.106	0.104	0.096	1C7U_A	N/A
3	pgenthreader.1	49.994	0.158	0.154	0.137	1EGW_A	N/A
4	blast.2	2e-22	0.171	0.163	0.133	1EGW_D	N/A
5	rpsblast.3	6e-24	0.144	0.142	0.133	1EGW_D	N/A
6	ffas.7	-0.519E+02	0.129	0.129	0.130	1HBX_A	N/A
7	pgenthreader.5	41.021	0.151	0.149	0.141	1HBX_A	N/A
8	blast.4	3e-12	0.141	0.135	0.111	1HBX_E	N/A
9	rpsblast.1	7e-28	0.132	0.130	0.120	1HBX_E	N/A
10	ffas.4	-0.553E+02	0.133	0.136	0.150	1K6O_B	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.