Pcons.net Protein Structure Prediction

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Saturday, April 20 2024

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Submission

22990 : NP_723045.1 COLLAGEN TYPE IV ALPHA 1, ISOFORM B [DROSOPHILA MELANOGASTER]

Your submitted sequence: sequence (280 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser hhpred2

rpsblast

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	ProQ / ProQresSum	Template	CATH	Alignment
1	N/A	4e-21	N/A	N/A	N/A	N/A	1m1j_A	1.20.5.50.14.1	N/A
2	N/A	1e-20	N/A	N/A	N/A	N/A	1m1j_A	1.20.5.50.14.1	N/A
3	N/A	8e-18	N/A	N/A	N/A	N/A	1m1j_A	1.20.5.50.14.1	N/A
4	N/A	1e-14	N/A	N/A	N/A	N/A	1m1j_A	1.20.5.50.14.1	N/A
5	N/A	2e-09	N/A	N/A	N/A	N/A	1m1j_A	1.20.5.50.14.1	N/A
6		2e-09	0.010	0.022	0.072		4KML_A	N/A
7		7e-09	0.012	0.027	0.088		4KML_A	N/A
8		2e-08	0.007	0.022	0.082		4KML_A	N/A
9		3e-08	0.007	0.026	0.103		4KML_A	N/A
10		4e-08	0.006	0.025	0.099		4KML_A	N/A

References

Marchler-Bauer A et al (2002) "CDD: a database of conserved domain alignments with links to domain three-dimensional structure." Nucleic Acids Res 30(1), 281-283. [LINK]