Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

Main Menu

Submission

22990 : NP_723045.1 COLLAGEN TYPE IV ALPHA 1, ISOFORM B [DROSOPHILA MELANOGASTER]

Your submitted sequence: sequence (280 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser hhpred2

PMODELLER (only used 35 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.8	-0.137E+02	0.000	0.020	0.101	1NAY_A	1.20.5.320.1.2
2	ffas.10	-0.869E+01	0.000	0.009	0.047	1O91_A	2.60.120.40.7.1
3	pgenthreader.10	44.314	0.012	0.092	0.413	1S58_A	2.170.30.10.3.1
4	ffas.3	-0.296E+02	0.009	0.041	0.170	1WCK_A	N/A
5	ffas.5	-0.150E+02	0.008	0.038	0.157	2PNE_A	N/A
6	pgenthreader.4	38.527	0.017	0.046	0.163	2PNE_A	N/A
7	pgenthreader.5	38.527	0.003	0.027	0.125	2PNE_A	N/A
8	ffas.4	-0.162E+02	0.010	0.039	0.153	3BOG_A	N/A
9	ffas.9	-0.101E+02	0.006	0.019	0.069	3DMW_A	N/A
10	pgenthreader.6	46.784	0.009	0.092	0.424	3FBY_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.