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© Arne Elofsson

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22988 : id:22987:1-42,329-396

Your submitted sequence: sequence (110 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 39 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.8
900.0430.0600.128 1BXT_A2.40.50.110.2.4 3.10.20.120.1.1
2
ffas.7
-0.625E+010.0430.0750.205 1FUJ_A2.40.10.10.4.3 2.40.10.10.8.3
3
ffas.2
-0.686E+010.0300.0640.198 1KDQ_A2.40.10.10.35.1
4
rpsblast.10
1270.0100.0340.132 1NH2_C2.30.18.10.3.1
5
ffas.9
-0.604E+010.0410.0790.230 1OP8_A2.40.10.10.26.3 2.40.10.10.68.1
6
ffas.5
-0.633E+010.0280.013-0.049 1Q90_B1.20.810.10.2.1
7
pgenthreader.7
22.9850.0400.0800.238 1UX6_A4.10.1080.10.1.1 2.60.120.200.15.1
8
ffas.3
-0.659E+010.0300.018-0.031 1VF5_A1.20.810.10.2.1
9
pgenthreader.4
12.0000.0100.0260.092 1WMI_BN/A
10
pgenthreader.5
12.0000.0020.0240.110 1WMI_BN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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