Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 19 2024

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Submission

22987 : PCONSomd

Your submitted sequence: sequence (396 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 50 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	rpsblast.10	4e-46	0.236	0.276	0.437	1OZN_A	3.80.10.10.1.1
2	blast.5	1e-20	0.208	0.253	0.434	1XKU_A	3.80.10.10.5.1
3	ffas.3	-0.576E+02	0.291	0.345	0.561	1XKU_A	3.80.10.10.5.1
4	pgenthreader.3	15.229	0.294	0.350	0.574	1XKU_A	3.80.10.10.5.1
5	pgenthreader.4	15.229	0.013	0.019	0.041	1XKU_A	3.80.10.10.5.1
6	rpsblast.9	2e-46	0.195	0.240	0.419	1XKU_A	3.80.10.10.5.1
7	ffas.16	-0.498E+02	0.211	0.278	0.547	2A0Z_A	N/A
8	ffas.2	-0.598E+02	0.269	0.331	0.579	2FT3_A	3.80.10.10.5.2
9	pgenthreader.10	17.529	0.279	0.334	0.556	2FT3_A	3.80.10.10.5.2
10	pgenthreader.7	14.064	0.171	0.228	0.456	2ID5_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.