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© Arne Elofsson

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22986 : id:22985:1-156

Your submitted sequence: sequence (156 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 44 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
pgenthreader.8
80.5750.3470.3470.349 1C3T_A3.10.20.90.1.1
2
blast.10
2e-460.3510.3510.350 1SIF_A3.10.20.90.1.1
3
ffas.12
-0.491E+020.2460.2550.289 1TTN_AN/A
4
rpsblast.6
4e-470.3310.3290.321 1V5O_A3.10.20.90.30.1
5
ffas.14
-0.489E+020.3390.3490.391 1WH3_AN/A
6
blast.2
2e-500.3590.3630.378 1YX5_B3.10.20.90.1.1
7
ffas.7
-0.511E+020.3690.3710.378 1YX5_B3.10.20.90.1.1
8
pgenthreader.7
81.5060.3540.3620.393 2GBJ_A3.10.20.90.1.1
9
pgenthreader.5
82.4630.3310.3350.349 2GBM_A3.10.20.90.1.1
10
ffas.16
-0.485E+020.3090.3080.306 2JVC_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
© 2006 Stockholm University, Stockholm Bioinformatics Center