Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

22010 : id:22008:1-166,327-388

Your submitted sequence: sequence (228 aa)

Ready methods: PCONS PMODELLER blast dppas dppas2 env-ppas ffas hhpred2 muster pgenthreader ppas rpsblast wdppas wmuster wppas
Queued locally: itasser

PMODELLER (used 121 models from 13 methods, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	blast.6	4.2	0.000	-0.002	-0.011	1GVE_A	3.20.20.100.2.1
2	ffas.9	-0.843E+01	0.018	0.023	0.043	1M9O_A	4.10.1000.10.1.1
3	hhpred2.10	0.62	0.017	0.019	0.026	1M9O_A	4.10.1000.10.1.1
4	pgenthreader.3	13.281	0.013	0.058	0.237	1MV3_A	N/A
5	pgenthreader.4	13.281	0.012	0.024	0.072	1MV3_A	N/A
6	pgenthreader.9	35.720	0.017	0.054	0.203	1N7D_A	N/A
7	pgenthreader.8	36.335	0.016	0.063	0.251	1S58_A	2.170.30.10.3.1
8	muster.5		0.023	0.076	0.290	1W0RA3	N/A
9	wmuster.7		0.022	0.071	0.268	1W0RA3	N/A
10	pgenthreader.5	37.088	0.021	0.073	0.283	1YO8_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.