Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Wednesday, April 24 2024

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Submission

21910 : MADD_wt_755-775res

Your submitted sequence: sequence (23 aa)

Ready methods: PCONS PMODELLER blast dppas dppas2 env-ppas ffas hhpred2 muster pgenthreader ppas rpsblast wdppas wmuster wppas
Queued locally: itasser

PMODELLER (used 116 models from 13 methods, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	ffas.4	-0.332E+01	0.000	0.038	0.188	1CF7_B	1.10.10.10.48.1
2	ffas.1	-0.442E+01	0.000	0.073	0.363	1CKK_B	N/A
3	blast.4	11	0.000	0.063	0.313	1FOB_A	3.20.20.80.28.1
4	pgenthreader.10	20.227	0.050	0.210	0.850	1H5W_A	1.10.246.30.1.1 3.30.1350.20.1.1
5	blast.7	13	0.141	0.167	0.272	1HJQ_A	3.20.20.80.28.2
6	ffas.7	-0.314E+01	0.135	0.407	1.496	1HRT_I	2.70.10.10.1.1
7	ffas.2	-0.415E+01	0.166	0.216	0.417	1IQ5_B	N/A
8	dppas.7		0.168	0.186	0.259	1L1OC1	2.40.50.140.26.1 2.40.50.140.33.1 2.40.50.140.53.1 2.20.25.10.5.1 2.40.50.140.26.1 2.40.50.140.33.1 2.40.50.140.53.1 2.20.25.10.5.1
9	dppas2.5		0.171	0.189	0.259	1L1OC1	2.40.50.140.26.1 2.40.50.140.33.1 2.40.50.140.53.1 2.20.25.10.5.1 2.40.50.140.26.1 2.40.50.140.33.1 2.40.50.140.53.1 2.20.25.10.5.1
10	muster.5		0.171	0.189	0.259	1L1OC1	2.40.50.140.26.1 2.40.50.140.33.1 2.40.50.140.53.1 2.20.25.10.5.1 2.40.50.140.26.1 2.40.50.140.33.1 2.40.50.140.53.1 2.20.25.10.5.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.