Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Friday, April 26 2024

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Submission

10020 : T0954

Your submitted sequence: sequence (350 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: itasser

PMODELLER (only used 45 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.4	132.769	0.298	0.342	0.516	1ERJ_A	2.130.10.10.12.1
2	rpsblast.2	6e-14	0.029	0.024	0.003	1K32_B	2.120.10.60.1.1 2.130.10.10.6.1 3.30.750.44.1.1 2.30.42.10.11.1 3.90.226.10.8.1
3	blast.7	0.056	0.106	0.069	-0.078	1P22_A	1.20.1280.50.3.1 2.130.10.10.22.1
4	rpsblast.9	1e-12	0.148	0.120	0.006	1R5M_A	N/A
5	ffas.13	-0.385E+02	0.227	0.257	0.376	1VYH_C	N/A
6	pgenthreader.3	133.375	0.304	0.335	0.461	1VYH_C	N/A
7	ffas.14	-0.385E+02	0.225	0.271	0.457	2CO0_A	N/A
8	ffas.7	-0.389E+02	0.224	0.270	0.453	2G9A_A	N/A
9	ffas.5	-0.391E+02	0.223	0.260	0.407	2GNQ_A	N/A
10	ffas.2	-0.400E+02	0.223	0.272	0.466	2H9L_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.