Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

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Submission

23374 : T1001

Your submitted sequence: sequence (140 aa)

Ready methods: PCONS PMODELLER ffas pgenthreader rpsblast
Queued locally: blast lomets itasser hhpred2

PMODELLER (only used 30 models from 3 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.2	28.369	0.049	0.110	0.354	1CFR_A	N/A
2	ffas.8	-0.649E+01	0.043	0.052	0.090	1K6Z_A	3.30.1460.10.1.1
3	pgenthreader.10	27.457	0.048	0.098	0.298	1KNV_A	3.40.91.10.3.1
4	ffas.5	-0.688E+01	0.054	0.083	0.197	1PZE_A	3.40.50.720.12.2 3.90.110.10.1.2
5	rpsblast.3	0.055	0.028	0.006	-0.080	1QZV_U	N/A
6	ffas.4	-0.688E+01	0.052	0.077	0.176	1SOV_A	N/A
7	ffas.10	-0.632E+01	0.054	0.085	0.210	1T2E_A	3.40.50.720.12.1 3.90.110.10.1.1
8	rpsblast.9	5.9	0.021	0.015	-0.011	1W18_B	N/A
9	ffas.7	-0.661E+01	0.057	0.097	0.259	2A92_A	3.40.50.720.12.1 3.90.110.10.1.1
10	ffas.3	-0.719E+01	0.041	0.047	0.073	2BR1_A	3.30.200.20.4.1 1.10.510.10.12.1

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.