Pcons.net Protein Structure Prediction

Pcons.net Protein Structure Prediction Meta Server

Tuesday, April 16 2024

Main Menu

Submission

23051 : id:23050:271-376

Your submitted sequence: sequence (106 aa)

Ready methods: PCONS PMODELLER blast ffas pgenthreader rpsblast
Queued locally: lomets itasser hhpred2

PMODELLER (only used 38 models from 4 methods the score is NOT RELIABLE, models are sorted by average local predicted S-score (ProQres)

Rank	Model	Method Score	Pcons	Pcomb	ProQ2	Template	CATH
1	pgenthreader.4	27.511	0.040	0.081	0.243	1DE3_A	3.10.450.30.5.1
2	blast.2	19	0.032	0.029	0.015	1DG6_A	2.60.120.40.1.1
3	rpsblast.7	4.3	0.016	0.035	0.112	1IRU_Q	3.60.20.10.10.2
4	pgenthreader.9	26.184	0.040	0.085	0.266	1JHN_A	2.60.120.200.42.1 2.10.250.10.1.1
5	ffas.6	-0.591E+01	0.027	0.028	0.034	1NEK_C	1.20.1300.10.1.1
6	rpsblast.8	9.3	0.022	0.057	0.197	1Q5Q_C	3.60.20.10.25.1
7	rpsblast.5	0.37	0.012	0.030	0.100	1QZV_U	N/A
8	pgenthreader.1	15.722	0.020	0.035	0.095	1RF3_B	N/A
9	pgenthreader.2	15.722	0.008	0.032	0.126	1RF3_B	N/A
10	pgenthreader.6	26.413	0.021	0.040	0.114	1U6P_A	N/A

References

Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.