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© Arne Elofsson

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22973 : Repeat3-Q13936

Your submitted sequence: sequence (339 aa)

Ready methods: PCONS PMODELLER blast rpsblast
Queued locally: lomets itasser hhpred2

PCONS (only used 20 models from 2 methods the score is NOT RELIABLE, models are sorted by Pcomb score)
RankModelMethod ScorePconsPcombProQ2ProQ / ProQresSumTemplateCATHAlignment
1
rpsblast.5
2e-080.0650.1510.494 4DXW_DN/A
2
rpsblast.1
1e-140.0590.1460.495 4BGN_AN/A
3
blast.1
1e-180.0520.1320.451 5X0M_AN/A
4
rpsblast.4
2e-090.0550.1300.431 3RVY_BN/A
5
blast.5
0.0180.0660.1180.326 5XSY_AN/A
6
blast.2
2e-180.0590.1130.329 5XSY_AN/A
7
rpsblast.6
1e-060.0590.0990.261 3ZJZ_BN/A
8
rpsblast.10
0.0150.0200.0750.295 2PFF_BN/A
9
blast.3
2e-050.0410.0740.204 5XSY_AN/A
10
rpsblast.7
4e-040.0310.0670.209 3WKV_AN/A
 
References
Automatic consensus based fold recognition using Pcons, ProQ and Pmodeller. Björn Wallner, Huisheng Fang and Arne Elofsson (2003). Proteins. 53 Suppl 6:534-541.
Pcons5: combining consensus, structural evaluation and fold recognition scores. Björn Wallner and Arne Elofsson (2005). Bioinformatics., 21(23):4248-4254.
Identification of correct regions in protein models using structural, alignment and consensus information. Björn Wallner and Arne Elofsson (2006). Protein Sci., 15(4):900-913.
 
 
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